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anti spectrin  (Developmental Studies Hybridoma Bank)


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    Structured Review

    Developmental Studies Hybridoma Bank anti spectrin
    Anti Spectrin, supplied by Developmental Studies Hybridoma Bank, used in various techniques. Bioz Stars score: 95/100, based on 42 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/3a9/anti-Spectrin/pmc13156796-161-0-7
    Average 95 stars, based on 42 article reviews
    anti spectrin - by Bioz Stars, 2026-10
    95/100 stars

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    Related Articles

    Immunofluorescence:

    Article Title: Milton assembles large mitochondrial clusters, mitoballs, to sustain spermatogenesis
    Article Snippet: For PolG1 - Halo flies, the testes were incubated with 0.5 μM HaloTag TMR ligand (1:200, Promega, G8251) for 2 h at room temperature, mounted and imaged as described above. .. The primary antibodies used for immunofluorescence staining include mouse anti-ATP5A (1:1,000, Abcam, ab14748), mouse anti-dsDNA (1:200, Abcam, ab27156), mouse anti-α-spectrin [1:20, Developmental Studies Hybridoma Bank (DSHB), 3A9], and mouse anti-α-tubulin (1:20, DSHB, 12G10). .. The secondary antibodies used include goat anti-mouse IgG Alexa Fluor 488 (1:200, ThermoFisher Scientific, A-11029), goat anti-mouse IgG Alexa Fluor 594 (1:200, ThermoFisher Scientific, A-11005), and goat anti-mouse IgG Alexa Fluor 647 (1:200, ThermoFisher Scientific, A-21235).

    Article Title: Milton assembles large mitochondrial clusters, mitoballs, to sustain spermatogenesis.
    Article Snippet: For PolG1- Halo flies, the testes were incubated with 0.5 μM HaloTag TMR ligand (1:200, Promega, G8251) for 2 h at room temperature, mounted and imaged as described above. .. The primary antibodies used for immunofluorescence staining include mouse anti- ATP5A (1:1,000, Abcam, ab14748), mouse anti- dsDNA (1:200, Abcam, ab27156), mouse anti- α- spectrin [1:20, Developmental Studies Hybridoma Bank (DSHB), 3A9], and mouse anti- α- tubulin (1:20, DSHB, 12G10). .. The secondary antibodies used include goat anti- mouse IgG Alexa Fluor 488 (1:200, ThermoFisher Scientific, A- 11029), goat anti- mouse IgG Alexa Fluor 594 (1:200, ThermoFisher Scientific, A- 11005), and goat anti- mouse IgG Alexa Fluor 647 (1:200, ThermoFisher Scientific, A- 21235).

    Staining:

    Article Title: Milton assembles large mitochondrial clusters, mitoballs, to sustain spermatogenesis
    Article Snippet: For PolG1 - Halo flies, the testes were incubated with 0.5 μM HaloTag TMR ligand (1:200, Promega, G8251) for 2 h at room temperature, mounted and imaged as described above. .. The primary antibodies used for immunofluorescence staining include mouse anti-ATP5A (1:1,000, Abcam, ab14748), mouse anti-dsDNA (1:200, Abcam, ab27156), mouse anti-α-spectrin [1:20, Developmental Studies Hybridoma Bank (DSHB), 3A9], and mouse anti-α-tubulin (1:20, DSHB, 12G10). .. The secondary antibodies used include goat anti-mouse IgG Alexa Fluor 488 (1:200, ThermoFisher Scientific, A-11029), goat anti-mouse IgG Alexa Fluor 594 (1:200, ThermoFisher Scientific, A-11005), and goat anti-mouse IgG Alexa Fluor 647 (1:200, ThermoFisher Scientific, A-21235).

    Article Title: Milton assembles large mitochondrial clusters, mitoballs, to sustain spermatogenesis.
    Article Snippet: For PolG1- Halo flies, the testes were incubated with 0.5 μM HaloTag TMR ligand (1:200, Promega, G8251) for 2 h at room temperature, mounted and imaged as described above. .. The primary antibodies used for immunofluorescence staining include mouse anti- ATP5A (1:1,000, Abcam, ab14748), mouse anti- dsDNA (1:200, Abcam, ab27156), mouse anti- α- spectrin [1:20, Developmental Studies Hybridoma Bank (DSHB), 3A9], and mouse anti- α- tubulin (1:20, DSHB, 12G10). .. The secondary antibodies used include goat anti- mouse IgG Alexa Fluor 488 (1:200, ThermoFisher Scientific, A- 11029), goat anti- mouse IgG Alexa Fluor 594 (1:200, ThermoFisher Scientific, A- 11005), and goat anti- mouse IgG Alexa Fluor 647 (1:200, ThermoFisher Scientific, A- 21235).

    Virus:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    Recombinant:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    Protease Inhibitor:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    Cloning:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    Reverse Transcription:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    Real-time Polymerase Chain Reaction:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    RNA Sequencing:

    Article Title: Genetic compensation between ribosomal protein paralogs mediated by a cognate circular RNA.
    Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit anti-RpL22 This paper N/A Guinea pig anti-RpL22-like This paper N/A Mouse anti-RpL22-like Vassie Ware (Kearse et al.)18 N/A Mouse anti-Fibrillarin [38F3] Abcam Cat#Ab4566; RRID: AB_304523 Guinea pig anti-Vasa Toshie Kai (Patil et al.)80 N/A Mouse anti-a-Spectrin DSHB Cat# 3A9; RRID: AB_528473 Mouse anti-Bam DSHB Cat#Bam; RRID: AB_10570327 Mouse anti-Cyclin B DSHB Cat#F2F4; RRID: AB_528189 Rabbit anti-eIF4E-1 Paul Lasko (Ghosh and Lasko)60 N/A Mouse anti-Lamin Dm0 DSHB Cat#ADL67.10; RRID: AB_528336 Mouse anti-Actin DSHB Cat#JLA20; RRID: AB_528068 Mouse anti-FLAG Sigma Cat#F3165; RRID: AB_259529 Rabbit anti-HA Sigma Cat#H6908; RRID: AB_260070 Bacterial and virus strains Gateway One Shot TOP10 chemically competent E. coli Invitrogen Cat#C404003 Chemicals, peptides, and recombinant proteins TRIzol reagent Invitrogen Cat#15596018 Protein A/G agarose beads Merck Millipore Cat#IP05 cOmplete Protease inhibitor cocktail Roche Cat#11697498001 Critical commercial assays Gateway pENTR/D-TOPO Cloning kit Invitrogen Cat#K240020SP Gateway LR Clonase II Enzyme mix Invitrogen Cat#11791020 Direct-zol miniprep kit Zymo Research Cat#R2052 M-MLV Reverse Transcriptase Promega Cat#M1701 KAPA SYBR FAST qPCR Master Mix ABI Prism Kapa Biosystems Cat#KK4605 Superscript III Reverse Transcriptase Invitrogen Cat#18080-044 BaseScope Assay v2 RED kit ACDbio Cat#323910 Deposited data RNA sequencing data with RNase R treatment This paper PRJNA935838 Experimental models: Cell lines D. melanogaster: S2 (Serum-independent) Steve Cohen N/A D. melanogaster: S2 (Serum-dependent) Chin-Tong Ong N/A Experimental models: Organisms/strains D. melanogaster: Oregon-R-P2 BDSC 2376 D. melanogaster: vasa-Gal4/CyO Yukiko Yamashita (Salzmann et al.)81 N/A D. melanogaster: MTD-Gal4 BDSC 31777 D. melanogaster: RpL22 RNAi [HMS00143] BDSC 34828 D. melanogaster: RpL22 RNAi 2 [KK109432] VDRC 104506 D. melanogaster: RpL22[KG099650/FM7c] BDSC 15203 D. melanogaster: RpL22-like RNAi [GL00729] BDSC 42773 D. melanogaster: smt3 RNAi [HMS01540] BDSC 36125 D. melanogaster: lwr RNAi [GL00624/CyO] BDSC 37481 D. melanogaster: smt3 [04493]/CyO BDSC 11378 (Continued on next page) 16 Cell Reports 43, 114228, May 28, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER D. melanogaster: UASp-FLAG-RpL22/TM3 This paper N/A D. melanogaster: UASp-FLAG-RpL22-like/TM3 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #1 This paper N/A D. melanogaster: circRpL22(NE,3S) RNAi #2 This paper N/A D. melanogaster: circRpL22(NE,3S) CRISPR/FM7c This paper N/A D. melanogaster: hRPL22-HA BDSC 78009 D. melanogaster: hRPL22L1-HA BDSC 78002 Oligonucleotides See Table S1 This paper N/A Recombinant DNA pPFW-RpL22-CDS This paper N/A pPFW-RpL22-like-CDS This paper N/A Valium22-circRpL22-shRNA#1 This paper N/A Valium22-circRpL22-shRNA#2 This paper N/A pAFW-RpL22-CDS This paper N/A pAFW-RpL22-K39R This paper N/A pAFW-RpL22-KNterR This paper N/A Software and algorithms Fiji ImageJ 2.14.0 https://imagej.net/software/fiji/ TopHat 1.4.0 Trapnell et al.82 Bowtie 0.12.9 Langmead et al.83 Other Express Five serum-free medium Gibco Cat#10486-025 Schneider’s Drosophila medium Gibco Cat#21720024 Fetal bovine serum Gibco Cat#10437028 RNase R Epicentre Cat#E0111-20D1 Recombinant RNasin Ribonuclease Inhibitor Promega Cat#N251A Linear Acrylamide Ambion Cat#AM9520 Cellfectin II reagent Gibco Cat#10362100

    other:

    Article Title: The transmembrane protein Syndecan is required for stem cell survival and maintenance of their nuclear properties
    Article Snippet: Samples were mounted in Vectashield media (Vector Laboratories, H-1000).



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    Image Search Results


    Elff acts transsynaptically to promote alpha-Spectrin accumulation. (A-D) Representative Z-projections of boutons from the indicated genotypes stained for alpha-Spectrin (green) and HRP (magenta). Scale bar: 5 µm. (E) Quantification of alpha-Spectrin intensity. Data are mean values normalized to control ± SD (control: 100.0 ± 18.8, elff JR1/ST1 : 23.1 ± 4.5; control: 100.0 ± 16.0, Pre > elff RNAi #1: 50.8 ± 18.4, Pre > elff RNAi #2: 57.0 ± 28.5; control: 100.0 ± 17.0, Post > elff RNAi #1: 94.1 ± 12.4, Post > elff RNAi #2: 107.8 ± 19.8). (F-G) Representative Z-projections of muscle 4 NMJs of the indicated genotypes stained for alpha-Spectrin (green) and HRP (magenta). Arrows indicate synaptic boutons. Scale bars: 5 µm. (H) Orthogonal projections from synaptic boutons (left) and expanded HRP webbing (right) in Post > Elff. Dotted lines in G indicate the areas used to generate orthogonal projections. Scale bars: 5 µm. (I) Quantification of NMJ webbing phenotype (control: 0% of NMJs with webbing, Pre > Elff: 5.50% of NMJs with webbing, Post > Elff: 71.0% of NMJs with webbing). Significance determined by Kruskal-Wallis test with Dunn’s multiple comparisons (E) or chi-square test (I) [ns, not significant, ****p<0.0001]. n ≥ 27, Animals ≥ 8.

    Journal: bioRxiv

    Article Title: Selective regulation of transsynaptic alignment and postsynaptic assembly by a novel NCAM family synaptic adhesion molecule

    doi: 10.64898/2026.03.13.710942

    Figure Lengend Snippet: Elff acts transsynaptically to promote alpha-Spectrin accumulation. (A-D) Representative Z-projections of boutons from the indicated genotypes stained for alpha-Spectrin (green) and HRP (magenta). Scale bar: 5 µm. (E) Quantification of alpha-Spectrin intensity. Data are mean values normalized to control ± SD (control: 100.0 ± 18.8, elff JR1/ST1 : 23.1 ± 4.5; control: 100.0 ± 16.0, Pre > elff RNAi #1: 50.8 ± 18.4, Pre > elff RNAi #2: 57.0 ± 28.5; control: 100.0 ± 17.0, Post > elff RNAi #1: 94.1 ± 12.4, Post > elff RNAi #2: 107.8 ± 19.8). (F-G) Representative Z-projections of muscle 4 NMJs of the indicated genotypes stained for alpha-Spectrin (green) and HRP (magenta). Arrows indicate synaptic boutons. Scale bars: 5 µm. (H) Orthogonal projections from synaptic boutons (left) and expanded HRP webbing (right) in Post > Elff. Dotted lines in G indicate the areas used to generate orthogonal projections. Scale bars: 5 µm. (I) Quantification of NMJ webbing phenotype (control: 0% of NMJs with webbing, Pre > Elff: 5.50% of NMJs with webbing, Post > Elff: 71.0% of NMJs with webbing). Significance determined by Kruskal-Wallis test with Dunn’s multiple comparisons (E) or chi-square test (I) [ns, not significant, ****p<0.0001]. n ≥ 27, Animals ≥ 8.

    Article Snippet: The following commercially available primary antibodies were used: anti-Bruchpilot (DSHB, nc82) [1:100]; anti-Discs large (DSHB, 4F3) [1:500 third instar, 1:100 second instar, 1:100 embryo]; anti-alpha Spectrin (DSHB, 3A9) [1:100 third instar, 1:50 second instar].

    Techniques: Staining, Control

    Elff is required for the differentiation of the postsynaptic compartment during mid-larval development. (A-F) Representative Z-projections of boutons in second instar larvae of the indicated genotypes, stained for HRP (magenta) and (A-B) alpha-Spectrin, (C-D) Dlg, or (E-F) GluRIIE (grayscale). Scale bar: 2 µm. (G) Quantification of alpha-Spectrin intensity. Data are mean values normalized to control ± SD (control: 100 ± 48.80, elff JR1/ST1 : 6.665 ± 8.820). (H) Quantification of Dlg intensity (control: 100 ± 48.42, elff JR1/ST1 : 10.81 ± 10.57). (I) Quantification of GluRIIE intensity (control: 100 ± 29.30, elff JR1/ST1 : 5.311 ± 5.195). Significance determined by Mann-Whitney test [****p<0.0001]. n ≥ 20, Animals ≥ 5.

    Journal: bioRxiv

    Article Title: Selective regulation of transsynaptic alignment and postsynaptic assembly by a novel NCAM family synaptic adhesion molecule

    doi: 10.64898/2026.03.13.710942

    Figure Lengend Snippet: Elff is required for the differentiation of the postsynaptic compartment during mid-larval development. (A-F) Representative Z-projections of boutons in second instar larvae of the indicated genotypes, stained for HRP (magenta) and (A-B) alpha-Spectrin, (C-D) Dlg, or (E-F) GluRIIE (grayscale). Scale bar: 2 µm. (G) Quantification of alpha-Spectrin intensity. Data are mean values normalized to control ± SD (control: 100 ± 48.80, elff JR1/ST1 : 6.665 ± 8.820). (H) Quantification of Dlg intensity (control: 100 ± 48.42, elff JR1/ST1 : 10.81 ± 10.57). (I) Quantification of GluRIIE intensity (control: 100 ± 29.30, elff JR1/ST1 : 5.311 ± 5.195). Significance determined by Mann-Whitney test [****p<0.0001]. n ≥ 20, Animals ≥ 5.

    Article Snippet: The following commercially available primary antibodies were used: anti-Bruchpilot (DSHB, nc82) [1:100]; anti-Discs large (DSHB, 4F3) [1:500 third instar, 1:100 second instar, 1:100 embryo]; anti-alpha Spectrin (DSHB, 3A9) [1:100 third instar, 1:50 second instar].

    Techniques: Staining, Control, MANN-WHITNEY

    A model of distinct mechanisms for Elff’s functions in postsynaptic maturation and glutamate receptor clustering. Left: Elff is required in trans for postsynaptic accumulation of spectrin. Its postsynaptic partner(s) and other possible interactors are not known. Right: Elff facilitates glutamate receptor clustering and synaptic apposition in cis and/or in trans by stabilizing transsynaptic interactions through an unknown mechanism. In this context, Elff may act as a membrane-bound protein and/or as a secreted adaptor for other adhesion proteins in the extracellular matrix of the synaptic cleft.

    Journal: bioRxiv

    Article Title: Selective regulation of transsynaptic alignment and postsynaptic assembly by a novel NCAM family synaptic adhesion molecule

    doi: 10.64898/2026.03.13.710942

    Figure Lengend Snippet: A model of distinct mechanisms for Elff’s functions in postsynaptic maturation and glutamate receptor clustering. Left: Elff is required in trans for postsynaptic accumulation of spectrin. Its postsynaptic partner(s) and other possible interactors are not known. Right: Elff facilitates glutamate receptor clustering and synaptic apposition in cis and/or in trans by stabilizing transsynaptic interactions through an unknown mechanism. In this context, Elff may act as a membrane-bound protein and/or as a secreted adaptor for other adhesion proteins in the extracellular matrix of the synaptic cleft.

    Article Snippet: The following commercially available primary antibodies were used: anti-Bruchpilot (DSHB, nc82) [1:100]; anti-Discs large (DSHB, 4F3) [1:500 third instar, 1:100 second instar, 1:100 embryo]; anti-alpha Spectrin (DSHB, 3A9) [1:100 third instar, 1:50 second instar].

    Techniques: Membrane